PP_006W0BD.1

PP_006W0BD.1
D. O. Alonso, U. Perez-Sautu, C. M. Bellomo, K. Prieto, A. Iglesias, R. Coelho, N. Periolo, I. Domenech, G. Talmon, R. Hansen, G. Palacios & V. P. Martinez

INEI - ANLIS Dr C G Malbran, Virologia

Sample details

Isolate name
ARLA17/NRC2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 17:55insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession L
INSDC accession M
INSDC accession S
NCBI release date
2020-03-31

Submission details

Submission ID
MN850097.1.L/MN850092.1.M/MN850087.1.S
Submitting group
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:57:47 UTC
Earliest release date
2020-03-31

Alignment and QC

Length L
6532 (99.5%)
# of SNPs L
385
Length M
3646 (99.1%)
# of SNPs M
205
# of inserted bases M
8
Length S
1844 (98.5%)
# of SNPs S
118
# of inserted bases S
7
# of deleted bases S
5

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • T47C
  • G53A
  • C74T
  • C131T
  • T143C
  • C146T
  • G149A
  • C155T
  • T182C
  • A197G
  • A200G
  • A218G
  • T269C
  • A296G
  • T297C
  • A302G
  • T326C
  • T338C

M

  • A57C
  • T74C
  • G114A
  • C159A
  • C174T
  • C190T
  • A192G
  • C231T
  • C243T
  • A264G
  • T324C
  • G339A
  • T345C
  • A360G
  • T363C
  • T387C
  • C394T
  • C408T

S

  • G63A
  • G66A
  • G120A
  • A135G
  • C172T
  • A219G
  • T225C
  • A240G
  • A261G
  • T306C
  • A312G
  • G315A
  • T336C
  • T357C
  • T366C
  • T396C
  • C417T
  • C444A
Deletions

S

1443, 1573, 1661-1663
Insertions

M

ins_3500:GCATATAT

S

ins_1482:CC, ins_1555:G, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:E2D
  • GPC:V8A
  • GPC:H294Y
  • GPC:V346I
  • GPC:T353I
  • GPC:V499I
  • GPC:I537V
  • GPC:T641I
  • GPC:T938A
  • GPC:T1023S
  • GPC:V1115I

Gc

  • Gc:T287A
  • Gc:T372S
  • Gc:V464I

Gn

  • Gn:E2D
  • Gn:V8A
  • Gn:H294Y
  • Gn:V346I
  • Gn:T353I
  • Gn:V499I
  • Gn:I537V
  • Gn:T641I

NSs

  • NSs:Q5R
  • NSs:E33G
  • NSs:L35S
  • NSs:Q40R
  • NSs:N47S
  • NSs:I62T

RdRp

  • RdRp:T141V
  • RdRp:L277S
  • RdRp:S338A
  • RdRp:R346K
  • RdRp:N364S
  • RdRp:A541V
  • RdRp:Q759H
  • RdRp:D780N
  • RdRp:S876A
  • RdRp:H1025Y
  • RdRp:E1032G
  • RdRp:N1033D
  • RdRp:D1303E
  • RdRp:S1440N
  • RdRp:K1750R
  • RdRp:Q1965H
  • RdRp:I2109V
Deletions
N/A
Insertions
N/A

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