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PP_001XLN7.2
Version 2
PP_001XLN7.1
Previous version
PP_001XLN7.2
Latest version
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Download FASTA
Download metadata TSV
China/PP_001XLN7.2/2024-06
Y. Sun
Xiamen University, School of Public Health
Sample details
Collection date
2024-06
Sampling location
China
Isolate name
nirse-K68N/N208Y
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A
INSDC
INSDC accession
PQ535508.1
NCBI release date
2024-11-06
NCBI update date
2024-11-06
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PQ535508.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-12-13 03:05:12 UTC
Date released
2025-12-13 03:12:56 UTC
Earliest release date
2024-11-06
Cited in
Mutational constraints on RSV F and its neutralization by antibodies (2026)
Cassandra AL Simonich, Teagan E McMahon, Gavin Juviler, Lucas Kampman, Helen Y Chu, Jesse D Bloom
From SeqSet:
PP_SS_661.1
(references PP_001XLN7.2)
Alignment and QC
Length
1725 (11.3%)
# of SNPs
90
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
A
5718
G
T
5726
A
T
5741
C
C
5754
T
C
5756
T
T
5759
C
C
5768
T
G
5892
A
A
5898
G
G
5900
A
T
5909
A
C
5915
T
A
5930
G
A
5933
G
C
6005
A
G
6010
A
A
6035
G
C
6059
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
PP109421.1
reference
Substitutions
F
F:
T
8
A
F:
L
20
F
F:
E
66
K
F:
K
68
E
F:
I
79
M
F:
S
105
N
F:
N
124
K
F:
K
191
R
F:
N
208
Y
F:
S
213
R
F:
S
276
N
F:
T
357
K
F:
N
371
Y
F:
I
384
V
F:
A
540
S
F:
V
557
I
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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