PP_001XLN7.1

Display Name: China/PP_001XLN7.1/2024-06
Y. Sun

Sample details

Collection date
2024-06
Country
China

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:42insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A

Authors

Author affiliations
Xiamen University, School of Public Health

INSDC

INSDC accession
NCBI release date
2024-11-06
NCBI update date
2024-11-06

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1725
Completeness
11.33%
# of SNPs
90
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
PQ535508.1
Submitting group
Date submitted
2025-05-22 14:41:42 UTC
Date released
2025-05-22 15:09:16 UTC
Earliest release date
2024-11-06

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • A5718G
  • T5726A
  • T5741C
  • C5754T
  • C5756T
  • T5759C
  • C5768T
  • G5892A
  • A5898G
  • G5900A
  • T5909A
  • C5915T
  • A5930G
  • A5933G
  • C6005A
  • G6010A
  • A6035G
  • C6059T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:T8A
  • F:L20F
  • F:E66K
  • F:K68E
  • F:I79M
  • F:S105N
  • F:N124K
  • F:K191R
  • F:N208Y
  • F:S213R
  • F:S276N
  • F:T357K
  • F:N371Y
  • F:I384V
  • F:A540S
  • F:V557I
    • Deletions
    None
    Insertions
    None

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