PP_001WH0P.2

USA/PP_001WH0P.2/2022-10
J. Sereewit, B. E. Nunley, P. Roychoudhury & A. L. Greninger

University of Washington Dept. Laboratory Medicine and Pathology, Virology Division

Sample details

Collection date
2022-10
Sampling location
USA (WA)
Isolate name
RSV/A/USA/WA-UW-05560/2022

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:42insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.3

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2024-05-12
NCBI update date
2024-05-12
Raw reads accession

Host

Host

Submission details

Submission ID
PP760389.1
Submitting group
Date submitted
2025-12-13 01:04:55 UTC
Date released
2025-12-13 01:12:40 UTC
Earliest release date
2024-05-12

Alignment and QC

Length
15048 (98.7%)
# of SNPs
207
# of inserted bases
1
# of unknown bases
26

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C90T
  • C183T
  • G240A
  • C379T
  • C531A
  • G587T
  • G590A
  • A644G
  • G766A
  • G1034A
  • G1050A
  • G1077A
  • T1359C
  • T1413A
  • T1422C
  • C1788T
  • C1806T
  • G1893A
Deletions
N/A
Insertions

ins_3154:A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:K272M
  • F:S276N

G

  • G:I60V
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:A116V
  • G:V131D
  • G:I134K
  • G:N178G
  • G:P222L
  • G:G224E
  • G:P230T
  • G:S243I
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:D284G

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:L1705I
  • L:T1709S
  • L:N1723S
  • L:E1725G
  • L:G1731D

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:V352A

NS2

  • NS2:T16A

P

  • P:L55P
  • P:T92M
Deletions
N/A
Insertions
N/A

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