PP_001GYY6.2

Japan/PP_001GYY6.2/2019-08-02
T. Tamura & R. Saito

Division of International Health; 1-757 Asahimachi dori, Niigata, Niigata 951-8510

Sample details

Collection date
2019-08-02
Sampling location
Japan
Isolate name
HRSV/A/Japan/19U006iso/2019

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.2.2

INSDC

INSDC accession
NCBI release date
2025-05-02
NCBI update date
2025-05-17

Host

Host

Submission details

Submission ID
LC871610.1
Submitting group
Date submitted
2025-05-28 12:27:48 UTC
Date released
2025-05-28 12:28:26 UTC
Earliest release date
2025-05-02

Alignment and QC

Length
15226 (100%)
# of SNPs
146
# of inserted bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • T468C
  • A526C
  • A552T
  • G558A
  • G637A
  • T781C
  • C990A
  • C1012T
  • G1050A
  • T1330C
  • T1359C
  • T1621C
  • T1647C
  • T1668C
  • T1776A
  • C1788T
Deletions
N/A
Insertions
ins_4174:A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:S275F

G

  • G:H67N
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:A122V
  • G:I133N
  • G:P143T
  • G:R151H
  • G:G224E
  • G:I265L
  • G:Y273H
  • G:D284G
  • G:E295K

L

  • L:N37D
  • L:P171L
  • L:R256K
  • L:L1438Q
  • L:K1722N
  • L:N1723S
  • L:I1741M
  • L:T1773M
  • L:I1950T

M2-1

  • M2-1:S176P
  • M2-1:A188V

M2-2

  • M2-2:P2S
  • M2-2:Y24C

N

  • N:V352A

P

  • P:L55P
  • P:T69I
Deletions
N/A
Insertions
N/A

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