PP_000R9CJ.3

Display Name: Kazakhstan/PP_000R9CJ.3/2021-05-14
K. T. Sultankulova, G. O. Shynybekova, N. S. Kozhabergenov, N. N. Mukhami, O. V. Chervyakova, Y. D. Burashev, K. D. Zakarya, A. K. Nakhanov, K. B. Barakbayev & M. B. Orynbayev

Sample details

Collection date
2021-05-14
Country
Kazakhstan
Admin level 1
Zhalagash

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:11insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Research Institute for Biological Safety Problems, Molecular Biology and Genetic Engineering

INSDC

INSDC accession S
NCBI release date
2022-10-19

Alignment and QC metrics S

Length S
491
Completeness S
29.37%
# of SNPs S
67
# of inserted bases S
0
# of deleted bases S
0
# of ambiguous bases S
0
# of unknown bases S
0
# of frame shifts S
0
# of stop codons S
0

Submission details

Submission ID
ON783803.1.S
Submitting group
Date submitted
2024-10-29 17:10:51 UTC
Date released
2024-10-29 17:15:40 UTC
Earliest release date
2022-10-19

Lineage

Segment S Lineage
IV.1

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:A149C
  • S:C154A
  • S:C166T
  • S:G169A
  • S:T172C
  • S:C178A
  • S:T182C
  • S:G190A
  • S:T193C
  • S:T199C
  • S:C208T
  • S:C217T
  • S:A226T
  • S:G229A
  • S:G262A
  • S:A268C
  • S:G271A
  • S:T289C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:N32H
  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
    • Deletions
    None
    Insertions
    None

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