PP_000R9CJ.1

Display Name: Kazakhstan/PP_000R9CJ.1/2021-05-14
A.K. Nakhanov, G.O. Shynybekova, K.B. Barakbayev, K.D. Zakarya, K.T. Sultankulova, M.B. Orynbayev, N.N. Mukhami, N.S. Kozhabergenov, O.V. Chervyakova, Y.D. Burashev

Submission details

Submission ID
ON783803.1.S
Submitter
insdc_ingest_user
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-08-27 12:10:45 UTC
Date released
2024-08-27 12:15:34 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-08-27 12:11insdc_ingest_userOPEN
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data

Authors

Author affiliations
Research Institute for Biological Safety Problems, Molecular Biology and Genetic Engineering

Alignment states and QC metrics S

Completeness S
29.37%
Length S
491
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
67
Total unknown nucs S
0

Sample details

Collection subdivision level 1
Zhalagash
Collection subdivision level 2
Asia
Collection country
Kazakhstan
Collection date
2021-05-14

INSDC

INSDC accession S
ON783803.1
NCBI release date
2022-10-19

Nucleotide mutations

Substitutions

S

  • S:A149C
  • S:C154A
  • S:C166T
  • S:G169A
  • S:T172C
  • S:C178A
  • S:T182C
  • S:G190A
  • S:T193C
  • S:T199C
  • S:C208T
  • S:C217T
  • S:A226T
  • S:G229A
  • S:G262A
  • S:A268C
  • S:G271A
  • S:T289C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    NP

  • NP:N32H
  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
    • Deletions
    None
    Insertions
    None