PP_000R8M0.3

Turkey/PP_000R8M0.3/2021
A. T. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin & M. Bakir

Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology

Sample details

Collection date
2021
Sampling location
Turkey
Isolate name
TR-SIVAS-C22M-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:11insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession S
NCBI release date
2023-02-01

Host

Host

Submission details

Submission ID
ON254095.1.S
Submitting group
Date submitted
2024-10-29 17:10:51 UTC
Date released
2024-10-29 17:15:40 UTC
Earliest release date
2023-02-01

Lineage

Segment S Lineage
V

Alignment and QC

Length S
1673 (100%)
# of SNPs S
256
# of inserted bases S
1

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T49C
  • A50T
  • G54A
  • T79C
  • A81G
  • G99A
  • G100A
  • A109G
  • C115T
  • G134A
  • C142T
  • T157C
  • C166T
  • G171A
  • T175A
  • C178A
  • T182C
  • C187T
Deletions
N/A
Insertions

S

ins_1577:A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N9S
  • NP:R15K
  • NP:V27M
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:K265R
  • NP:R270K
  • NP:N293K
  • NP:S301G
  • NP:A307P
Deletions
N/A
Insertions
N/A

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