PP_007NW92.2

Chile/Patient_1054/2022-11-25
H. Ramos, E. Fuentes-Luppichini, E. Gutierrez, P. Castillo-Torres, C. Pardo-Roa, M. Ferres & J. Angulo

Pontificia Universidad Catolica de Chile, Area de biomedicina

Sample details

Collection date
2022-11-25
Sampling location
Chile (Region de La Araucania)
Isolate name
Patient_1054

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2026-09-30

Host

Host

Submission details

Submission ID
PX111623.2.L
Submitting group
Date submitted
2026-10-07 00:00:18 UTC
Date released
2026-10-07 00:01:13 UTC
Earliest release date
2026-09-30

Files

Annotations

Alignment and QC

Length L
6455 (94.8%)
# of SNPs L
391
# of unknown bases L
237

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • C74T
  • A80G
  • C107T
  • C131T
  • C146T
  • C147T
  • G149A
  • C155T
  • C173T
  • T182C
  • T215C
  • A218G
  • A233C
  • T278C
  • A296G
  • T297C
  • A302G
  • T326C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

RdRp

  • RdRp:T141I
  • RdRp:R144K
  • RdRp:L277S
  • RdRp:K281R
  • RdRp:S338A
  • RdRp:R346K
  • RdRp:I402V
  • RdRp:A541V
  • RdRp:D780N
  • RdRp:N1033D
  • RdRp:K1082R
  • RdRp:D1303E
  • RdRp:V1665I
  • RdRp:D2106E
  • RdRp:I2109M
Deletions
N/A
Insertions
N/A

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