PP_0079G2P.1

Germany/W130138/2026-07-13
Clemens Lier, Cornelius Rohde, Katharina Kowalski, Markus Eickmann, Stephan Becker, Frauke Borgans & Timo Wolf

Institute of Virology, Philipps University of Marburg; Infectious Diseases Department, University Hospital Frankfurt

Sample details

Collection date
2026-07-13
Sample received date
2026-07-13
Sampling location
Germany
City
Frankfurt

Data use terms

Data use terms
OPEN
Data use terms URL

Outbreak

Outbreak
Bdbv-2026

Sampling

Collection device
Serum tube
Collection method
Phlebotomy

Host

Host

Sequencing

Sequencing date
2026-07-19
Sequencing instrument
NextSeq 1000
Sequencing protocol
Twist Comprehensive Viral Research Panel
Sequencing assay type
Illumina DNA Sequencing
Sequenced by - organization
Institute of Virology - Philipps University of Marburg
Sequenced by - contact name
Clemens Lier
Sequenced by - contact email
clemens.lier@uni-marburg.de
Reference genome accession
NC_014373.1
Depth of coverage
200

Submission details

Submission ID
W130138
Submitting group
Date submitted
2026-07-23 09:09:36 UTC
Date released
2026-07-23 09:12:15 UTC
Earliest release date
2026-07-23

Alignment and QC

Length
18914 (99.8%)
# of SNPs
219
# of inserted bases
1
# of ambiguous bases
2

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • C261T
  • A266G
  • C530T
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • G1924A
  • A1943G
  • A1954G
  • A2007G
  • G2027A
Deletions
N/A
Insertions
ins_18902:A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:P365S
  • GP:P367L
  • GP:Y387H
  • GP:P389L
  • GP:R394G
  • GP:T458I
  • GP:P481L
  • GP:T486I
  • GP:A489V
  • GP:R506S

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:N496D
  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP24

  • VP24:S24N

VP30

  • VP30:H5Y

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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