REVOKED

PP_006W5U7.3

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Switzerland/PP_006W5U7.3/2026-05-04
Guido Bloemberg, Valentin Chudzinski, Samuel Cordey, Michael Huber, Florian Laubscher, Francisco-Javier Pérez-Rodríguez, Ian Pichler, Manuel Schibler, Walter Zingg, Valentine Thomasson, Gabriela Ziltener & Isabella Eckerle

University of Zurich, Zurich, Switzerland; University Hospitals of Zurich, Zurich Switzerland; University Hospitals of Geneva, Geneva, Switzerland

Sample details

Collection date
2026-05-04
Sampling location
Switzerland

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2026-05-10 21:15isabellaeckerleRESTRICTED until 2027-05-10
Data use terms URL

Host

Host

Submission details

Submission ID
ANDV-Switzerland-Hu-3337-2026_L.1
Submitting group
Date submitted
2026-05-11 11:23:16 UTC
Date released
2026-05-11 11:23:47 UTC
Earliest release date
2026-05-10

Alignment and QC

Length L
6561 (100%)
# of SNPs L
389
Length M
3657 (99.6%)
# of SNPs M
209
Length S
1860 (99.2%)
# of SNPs S
127
# of inserted bases S
6
# of deleted bases S
2

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • T47C
  • G62A
  • T68G
  • C74T
  • C131T
  • C146T
  • C147T
  • G149A
  • C155T
  • C173T
  • T182C
  • T215C
  • A218G
  • A233C
  • T278C
  • A296G
  • T297C
  • A302G

M

  • G45A
  • T74C
  • T90C
  • G114A
  • C147T
  • C174T
  • C190T
  • A192G
  • C231T
  • C243T
  • A264G
  • T312C
  • C315T
  • G339C
  • T345C
  • A360G
  • T363C
  • A381G

S

  • G63A
  • G66A
  • G120A
  • A135G
  • T202C
  • A219G
  • T225C
  • T244C
  • T306C
  • G315A
  • A318G
  • C328T
  • C417T
  • C444A
  • G450A
  • T454C
  • C459T
  • G465A
Deletions

S

1443, 1573
Insertions

S

ins_1486:T, ins_1555:A, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:V8A
  • GPC:I114V
  • GPC:H294Y
  • GPC:V346I
  • GPC:T353V
  • GPC:T516I
  • GPC:I537V
  • GPC:T1023A
  • GPC:S1055T
  • GPC:V1127I

NSs

  • NSs:Q5R
  • NSs:E33G
  • NSs:L35S
  • NSs:I62T

RdRp

  • RdRp:T141I
  • RdRp:L277S
  • RdRp:S338A
  • RdRp:R346K
  • RdRp:I402V
  • RdRp:A541V
  • RdRp:D780N
  • RdRp:N1033D
  • RdRp:D1303E
  • RdRp:V1665I
  • RdRp:K1750R
  • RdRp:T2113A
Deletions
N/A
Insertions
N/A

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