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PP_006W0UC.1

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Argentina/PP_006W0UC.1

D. Alonso, C. Bellomo, U. Perez-Sautu, K. Prieto, S. Kehl, R. Coelho, N. Periolo, M. Sanchez Lockhart, G. Palacios & V. Martinez

Malbran Institute, Virology

Sample details

Sampling location

Argentina

Isolate name

Arg-h484

Data use terms

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

INSDC

INSDC accession L

OP555736.1

INSDC accession M

OP555731.1

INSDC accession S

OP555730.1

NCBI release date

2023-10-10

Host

human (Homo sapiens)

Submission details

Submission ID

OP555736.1.L/OP555731.1.M/OP555730.1.S

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-05-09 17:55:42 UTC

Date released

2026-05-09 17:57:47 UTC

Earliest release date

2023-10-10

Alignment and QC

Length L

6443 (98.2%)

# of SNPs L

1260

Length M

3622 (99.2%)

# of SNPs M

743

# of inserted bases M

# of deleted bases M

Length S

1881 (99%)

# of SNPs S

305

# of inserted bases S

# of deleted bases S

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

T47C
A65G
C74G
T77G
T83A
A86G
C88G
G89T
T91C
A98G
A104G
C107T
C114T
A116G
C131T
C137G
C146T
C147T

M

A28G
A32C
T34G
G38A
A39G
G41A
G43T
G45T
T47G
T48A
A51G
C67T
G70A
T75C
C76T
T78G
A89C
G93A

S

G28A
G33A
G63A
G66A
C72T
G120A
G129A
G133A
A135G
C156G
T225C
A234G
A240C
T262C
C310T
A312G
T327A
C328T

Deletions

M

3476-3488, 3492-3497, 3548, 3566, 3582

S

1400-1403, 1473, 1500, 1527-1532, 1633, 1634, 1639, 1661, 1717, 1745, 1746

Insertions

M

ins_50:G, ins_3560:AA, ins_3587:A

S

ins_1336:CAGC, ins_1341:GGTGCT, ins_1353:TAGGTTG, ins_1383:T, ins_1451:A, ins_1483:C, ins_1553:GAAT, ins_1568:AGCAT, ins_1587:GTATAGGTTTTGATTAGG, ins_1628:A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references