This is not the latest version of this sequence entry.

The latest version is:PP_006W01Z.2

PP_006W01Z.1

Argentina/PP_006W01Z.1

V. P. Martinez, U. Perez-Sautu, D. O. Alonso, N. Di Paola, C. M. Bellomo, A. A. Iglesias, R. M. Coelho, N. Periolo, E. R. Nagle, J. A. Chitty, C. B. Pratt, M. R. Wiley, J. Diaz, E. Biondo, L. Lewis, C. Anselmo, F. Pontoriero, E. Lavarra, J. H. Kuhn, M. Sanchez-Lockhart, A. Edelstein, D. Cisterna, J. Campos, M. Kaler, ..., C. Pratt

United States Army Medical Research Institute for Infectious Diseases USAMRIID, Center for Genome Sciences

Sample details

Sampling location

Argentina

Isolate name

Epuyen/18-19_Patient_2_11/23/18

Data use terms

Changed	User	Data use terms
2026-05-09 17:55	insdc_ingest_user	OPEN

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

INSDC

INSDC accession M

MN258215.1

INSDC accession S

MN258249.1

NCBI release date

2020-09-30

Host

human (Homo sapiens)

Submission details

Submission ID

MN258215.1.M/MN258249.1.S

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-05-09 17:55:42 UTC

Date released

2026-05-09 17:57:47 UTC

Earliest release date

2020-09-30

Alignment and QC

Length S

1804 (96.2%)

# of SNPs S

117

# of inserted bases S

# of deleted bases S

Length M

3386 (84.9%)

# of SNPs M

170

# of unknown bases M

268

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

T74C
G114A
C159A
C174T
C190T
A192G
C231T
C243T
A264G
T324C
G339A
T345C
A360G
T363C
T387C
C394T
C408T
T414C

S

T61C
G63A
G66A
G120A
A135G
C172T
A219G
T225C
A240G
T244C
A261G
T306C
A312G
G315A
A318G
T357C
T363C
T366C

Deletions

S

1443, 1573

Insertions

S

ins_1482:CC, ins_1555:G, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references