PP_0047FMS.2

Australia/PP_0047FMS.2/2022-12-05
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

WHO Collaborating Centre for Reference and Research on Influenza

Sample details

Collection date
2022-12-05
Sampling location
Australia (Victoria)
City
Melbourne
GISAID Isolate ID
EPI_ISL_17066832

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-24 06:54clydeOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Sampling

Sample type
Nasopharyngeal

Host

Host
Human

Submission details

Submission ID
hRSV/B/Australia/VIC-RCH0339/2022
Submitting group
Date submitted
2025-10-02 16:45:10 UTC
Date released
2025-10-03 10:38:34 UTC
Earliest release date
2025-09-24

Alignment and QC

Length
15222 (99.9%)
# of SNPs
122
# of inserted bases
24
# of deleted bases
2

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • G513T
  • G579A
  • C673T
  • G787A
  • G1385A
  • C1684T
  • G1732A
  • G1768A
  • C1792A
  • T1846C
  • C2074T
  • C2198T
  • A2367T
  • T2418C
  • C2511T
  • C2554T
Deletions

973, 4586
Insertions

ins_0:TTGCACACTCGAAAAAA, ins_3201:A, ins_15092:ATATAT

Amino acid mutations

Mutations called relative to the OP975389.1 reference

Substitutions

F

  • F:K68N
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:P245S
  • G:I252T
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:S295F

L

  • L:R73K
  • L:S169P
  • L:K570R
  • L:N839S
  • L:R1759K
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions
N/A
Insertions
N/A

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