PP_003QGV9.1

Morocco/PP_003QGV9.1/2024-06
S. Elkochri, I. Diawara, Z. Rhazzar, E. M. Belouad, Y. Elkadiri, M. Benlamari, T. Chouati, B. Elgharbaoui, N. Ahmadi, A. I. Lahlou, O. Nyabi, N. Touil, J.-L. Gala, K. Ennibi, L. Belyamani & E. El Fahime

Faculty of Medicine and Pharmacy of Rabat, Mohammed V University of Rabat, Morocco, Life and Health Sciences (SVS)

Sample details

Collection date
2024-06
Sampling location
Morocco (Rabat)

Data use terms

Data use terms
OPEN
Data use terms URL

Genotype

Genotype
B3

INSDC

INSDC accession
NCBI release date
2024-08-13
NCBI update date
2024-11-25

Host

Host

Submission details

Submission ID
PQ069064.2
Submitting group
Date submitted
2025-08-27 15:16:59 UTC
Date released
2025-08-27 15:31:27 UTC
Earliest release date
2024-08-13

Alignment and QC

Length
15896 (100%)
# of SNPs
873
# of inserted bases
2

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions
  • A50G
  • T73C
  • A92G
  • T100C
  • G122A
  • A197C
  • T224C
  • T248C
  • A260C
  • T356C
  • C383T
  • C404A
  • A413G
  • T422C
  • T443A
  • A461G
  • C470T
  • C473T
Deletions
N/A
Insertions
ins_5056:GG

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

C

  • C:R13K
  • C:Q27K
  • C:R38T
  • C:T39S
  • C:E40D
  • C:K78R
  • C:S88P
  • C:M129K
  • C:G171E

F

  • F:V7I
  • F:I10V
  • F:T22A
  • F:A105V
  • F:Q139R
  • F:H419R
  • F:A512T

H

  • H:H17Y
  • H:A174T
  • H:A176T
  • H:N178T
  • H:S211G
  • H:V220I
  • H:G235E
  • H:S240N
  • H:H252Y
  • H:D283G
  • H:F284L
  • H:S285G
  • H:F296L
  • H:R302G
  • H:E303D
  • H:T307I
  • H:R334Q
  • H:I346V

L

  • L:V34L
  • L:R77K
  • L:A81T
  • L:E98R
  • L:T131I
  • L:I149V
  • L:I150T
  • L:K215R
  • L:A252T
  • L:A271T
  • L:K441R
  • L:R447K
  • L:V596I
  • L:S616N
  • L:P617S
  • L:R623K
  • L:K626R
  • L:E628A

M

  • M:K204R

N

  • N:S144F
  • N:N427S
  • N:G431R
  • N:G443N
  • N:Y451H
  • N:G455E
  • N:S456P
  • N:A462V
  • N:S470G
  • N:M471T
  • N:S481F
  • N:G482S
  • N:L505S
  • N:G509D

P

  • P:S26P
  • P:V29I
  • P:A34E
  • P:Q45H
  • P:D46E
  • P:A48S
  • P:E52K
  • P:E54K
  • P:G74S
  • P:I95A
  • P:R98G
  • P:T105A
  • P:C109R
  • P:H111Y
  • P:V120I
  • P:D136E
  • P:D146N
  • P:K195R

V

  • V:S26P
  • V:V29I
  • V:A34E
  • V:Q45H
  • V:D46E
  • V:A48S
  • V:E52K
  • V:E54K
  • V:G74S
  • V:I95A
  • V:R98G
  • V:T105A
  • V:C109R
  • V:H111Y
  • V:V120I
  • V:D136E
  • V:D146N
  • V:K195R
Deletions
N/A
Insertions
N/A

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