PP_003KTD7.1

PP_003KTD7.1/2012-11-15
S. T. Kim, H.-M. Cheong, Y. Choi, K. J. Hwang, D.-W. Kim & M.-R. Yun

Korea Centers for Disease Control and Prevention, Pathogen Resource TF, Center for Infectious Diseases Research, Korea National Institute of Health

Sample details

Collection date
2012-11-15
Isolate name
08_40204-1

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-08-27 15:16insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
D9

INSDC

INSDC accession
NCBI release date
2020-01-14
NCBI update date
2020-01-14

Host

Host

Submission details

Submission ID
MN630022.1
Submitting group
Date submitted
2025-08-27 15:15:27 UTC
Date released
2025-08-27 15:26:33 UTC
Earliest release date
2020-01-14

Alignment and QC

Length
15880 (99.9%)
# of SNPs
384

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • G122A
  • A173G
  • T224A
  • C254T
  • G269A
  • A323G
  • T336C
  • G353A
  • C389T
  • T422C
  • A511G
  • T512C
  • A534G
  • G590A
  • A620C
  • G626A
  • T636C
  • G680A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

C

  • C:P14S
  • C:P25L
  • C:G169D

F

  • F:L3F
  • F:V14M
  • F:N92T
  • F:A105T

H

  • H:Q152R
  • H:R175S
  • H:V220T
  • H:G235E
  • H:N282H
  • H:R334Q
  • H:N390I
  • H:A400E
  • H:K424T
  • H:T446S
  • H:V451M
  • H:V608A

L

  • L:S39N
  • L:N55T
  • L:S102A
  • L:L116M
  • L:V120I
  • L:H191R
  • L:I212M
  • L:E527D
  • L:T622A
  • L:E628K
  • L:N641D
  • L:R699K
  • L:R794Q
  • L:R881K
  • L:G905D
  • L:T922S
  • L:L969I
  • L:K1031R

N

  • N:D135G
  • N:R143G
  • N:I320L
  • N:G443S
  • N:P467L
  • N:M471T
  • N:R516K

P

  • P:A21V
  • P:E54K
  • P:L135P
  • P:D138Y
  • P:N202S
  • P:S219I
  • P:Q253H
  • P:C254Y
  • P:R256L
  • P:P259L
  • P:P265L
  • P:G270E
  • P:N271S
  • P:S277N
  • P:I488V

V

  • V:A21V
  • V:E54K
  • V:L135P
  • V:D138Y
  • V:N202S
  • V:S219I
  • V:H232D
  • V:G237S
  • V:M254L
Deletions
N/A
Insertions
N/A

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