PP_003KTBB.1

PP_003KTBB.1/2010-10-04
S. T. Kim, H.-M. Cheong, Y. Choi, K. J. Hwang, D.-W. Kim & M.-R. Yun

Korea Centers for Disease Control and Prevention, Pathogen Resource TF, Center for Infectious Diseases Research, Korea National Institute of Health

Sample details

Collection date
2010-10-04
Isolate name
06_40201-1

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-08-27 15:16insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
H1

INSDC

INSDC accession
NCBI release date
2020-01-14
NCBI update date
2020-01-14

Host

Host

Submission details

Submission ID
MN630020.1
Submitting group
Date submitted
2025-08-27 15:15:27 UTC
Date released
2025-08-27 15:26:33 UTC
Earliest release date
2020-01-14

Alignment and QC

Length
15845 (99.7%)
# of SNPs
985

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • T49C
  • A99T
  • T100A
  • G122A
  • G124A
  • A134T
  • A143G
  • T224C
  • A230G
  • C254T
  • A260T
  • G269A
  • C275T
  • A281G
  • G299A
  • A338G
  • T362C
  • T392A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

C

  • C:D5G
  • C:R23G
  • C:T39S
  • C:P42S
  • C:K78R
  • C:L85F
  • C:S93P
  • C:N125D
  • C:V130M
  • C:S158L
  • C:K179R
  • C:R182K

F

  • F:V5A
  • F:N6S
  • F:A13T
  • F:A105T
  • F:N149S
  • F:A152V
  • F:A163T
  • F:H419Y
  • F:R436K
  • F:R456K
  • F:I467V
  • F:S494N
  • F:A512T
  • F:E526G
  • F:P537S

H

  • H:P18S
  • H:D149N
  • H:A174T
  • H:A176T
  • H:G235E
  • H:S240N
  • H:H252Y
  • H:V280I
  • H:N282K
  • H:F284L
  • H:F296L
  • H:R302G
  • H:E303G
  • H:R334Q
  • H:A359T
  • H:K364N
  • H:N390I
  • H:N405S

L

  • L:K54E
  • L:N55T
  • L:S115A
  • L:K148R
  • L:I149V
  • L:H157Q
  • L:Q160R
  • L:A252T
  • L:I296V
  • L:G325D
  • L:E332D
  • L:E368A
  • L:T420P
  • L:V446M
  • L:R447K
  • L:D512E
  • L:L610P
  • L:Y613H

M

  • M:I14V
  • M:Y26H
  • M:S27N
  • M:E210V

N

  • N:R6K
  • N:S139G
  • N:S144F
  • N:I406T
  • N:G422S
  • N:G443S
  • N:A447T
  • N:S450N
  • N:Y451S
  • N:S456P
  • N:S457G
  • N:P467L
  • N:M471T
  • N:L473P
  • N:S481Y
  • N:G482S
  • N:D484E
  • N:R497K

P

  • P:G25S
  • P:V29I
  • P:E30G
  • P:D46E
  • P:T49I
  • P:L65F
  • P:S66T
  • P:T71A
  • P:D89N
  • P:A90T
  • P:T92V
  • P:L100P
  • P:C109R
  • P:K121E
  • P:Q132R
  • P:G137D
  • P:T140A
  • P:L141F

V

  • V:G25S
  • V:V29I
  • V:E30G
  • V:D46E
  • V:T49I
  • V:L65F
  • V:S66T
  • V:T71A
  • V:D89N
  • V:A90T
  • V:T92V
  • V:L100P
  • V:C109R
  • V:K121E
  • V:Q132R
  • V:G137D
  • V:T140A
  • V:L141F
Deletions
N/A
Insertions
N/A

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