PP_0031E39.1

Display Name: Spain/PP_0031E39.1/2024-12-25
Maria Pinana, Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Maria Piquer, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Sample details

Collection date
2024-12-25
Country
Spain
Admin level 1
Catalonia

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-30 13:08agonzalezOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Alignment and QC metrics

Length
15197
Completeness
99.81%
# of SNPs
136
# of inserted bases
6
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Spain/CT-HUVH-496721/2024
Submitting group
Date submitted
2025-06-30 13:08:40 UTC
Date released
2025-06-30 13:09:53 UTC
Earliest release date
2025-06-30

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T33C
  • T48C
  • T144C
  • C212T
  • T357C
  • A386G
  • G434A
  • G513T
  • G579A
  • C998A
  • T1273C
  • G1385A
  • C1672T
  • G1732A
  • T1846C
  • A2059T
  • C2074T
  • C2198T
    • Deletions
    973, 4586
    Insertions
    ins_15092:ATATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:K65E
  • F:S190N
  • F:S211N
  • F:S389P
  • F:L538S

    • G

  • G:A74V
  • G:V94I
  • G:E97D
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H

    • L

  • L:S173L
  • L:K570R
  • L:V715I
  • L:K1171E
  • L:R1759K
  • L:S1931N
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:D35N
  • M2-2:C49F
  • M2-2:K63E

    • N

  • N:V97I

    • NS1

  • NS1:Y30H
  • NS1:M126I

    • SH

  • SH:I49T
    • Deletions
    None
    Insertions
    None

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