PP_002P5WM.2

USA/PP_002P5WM.2/2022-03
S. Goya, J. Sereewit, D. Pfalmer, T. V. Nguyen, S. A. K. M. Bakhash, E. B. Sobolik, A. L. Greninger & D. L. Pfalmer

UW Virology, Laboratory Medicine

Sample details

Collection date
2022-03
Sampling location
USA (WA)
Isolate name
hRSV/B/USA/202221067/2022

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-12-13
NCBI update date
2025-11-21
Raw reads accession

Host

Host

Submission details

Submission ID
OP965704.1
Submitting group
Date submitted
2025-11-21 18:37:18 UTC
Date released
2025-11-21 18:45:07 UTC
Earliest release date
2022-12-13

Alignment and QC

Length
15158 (99.4%)
# of SNPs
121
# of inserted bases
10
# of deleted bases
2
# of ambiguous bases
1
# of unknown bases
11
# of stop codons
1
Stop Codons
F:574

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • A134G
  • C254T
  • G513T
  • G579A
  • C688T
  • C998A
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • G2409A
  • C2554T
  • C2691T
  • G3036C
  • A3060G
Deletions

973, 4586
Insertions

ins_0:AAAAAA, ins_15092:ATAT

Amino acid mutations

Mutations called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:K68N
  • F:S190N
  • F:S211N
  • F:S389P
  • F:V469I
  • F:K574*

G

  • G:A74V
  • G:S100G
  • G:P120L
  • G:T131A
  • G:I137T
  • G:T139I
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:R1759K
  • L:V1965I
  • L:D1985N
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue