PP_00285VL.3

Australia/PP_00285VL.3/2016-09-19
F. Di Giallonardo, J. Kok, M. Fernandez, I. Carter, J. L. Geoghegan, D. E. Dwyer, E. C. Holmes, J. S. Eden & J.-S. Eden

The University of Sydney, Marie Bashir Institute for Infectious Diseases and Biosecurity & Sydney Medical School

Sample details

Collection date
2016-09-19
Sampling location
Australia
Isolate name
B/NSW/WM0884A/16

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.4.1

INSDC

INSDC accession
NCBI release date
2018-09-25
NCBI update date
2018-09-25

Host

Host

Submission details

Submission ID
MH760710.1
Submitting group
Date submitted
2026-10-10 14:02:14 UTC
Date released
2026-10-10 14:03:03 UTC
Earliest release date
2018-09-25

Files

Annotations

Alignment and QC

Length
14961 (98.3%)
# of SNPs
68
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • G507T
  • G513T
  • G579A
  • C644T
  • T935C
  • G1385A
  • T1846C
  • C2198T
  • T2328C
  • C3067T
  • C3082T
  • C3146T
  • C3180T
  • C3720T
  • C3726A
  • A3735G
  • C4048A
  • C4064T
Deletions
4586
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:K65Q
  • F:R191K
  • F:M206I
  • F:R209Q

G

  • G:A74V
  • G:S124P
  • G:T131A
  • G:I137T
  • G:N202T
  • G:P221T
  • G:L284P
  • G:I288T
  • G:I310T

L

  • L:A1479V
  • L:T1987I

M2-2

  • M2-2:I2T

N

  • N:V97I

NS2

  • NS2:Y118H
Deletions
N/A
Insertions
N/A

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