PP_0025MVA.1

Display Name: China/PP_0025MVA.1/2014-02-10
J. Song, H. Wang, T. I. Ng, A. Cui, S. Zhu, Y. Huang, L. Sun, Z. Yang, D. Yu, P. Yu, H. Zhang, Y. Zhang & W. Xu

Sample details

Collection date
2014-02-10
Country
China

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:45insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4

Authors

Author affiliations
National Institute for Viral Disease Control and Prevention, China Center for Disease Control and Prevention, WHO WPRO Measles Regional Reference Lab, Key Laboratory of Medical Virology Ministry of Health

INSDC

INSDC accession
NCBI release date
2018-12-10
NCBI update date
2018-12-10

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1725
Completeness
11.33%
# of SNPs
19
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
KY296694.1
Submitting group
Date submitted
2025-05-22 14:43:46 UTC
Date released
2025-05-22 14:49:58 UTC
Earliest release date
2018-12-10

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T5741C
  • T5762C
  • T5903A
  • T5948A
  • C6017T
  • A6161G
  • C6192T
  • T6193C
  • G6247A
  • A6277G
  • G6293A
  • C6300A
  • G6301A
  • G6329A
  • T6701C
  • C6731T
  • T6902C
  • G7232A
  • T7376C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:L173S
  • F:R191K
  • F:N201S
  • F:M206I
  • F:R209K
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue