PP_002053M.2

Display Name: Japan/PP_002053M.2/2005-09-15
K. Goto-Sugai, H. Tsukagoshi, K. Mizuta, S. Matsuda, M. Noda, T. Sugai, Y. Saito, N. Okabe, M. Tashiro, K. Kozawa, R. Tanaka, Y. Morita, A. Nishina & H. Kimura

Sample details

Collection date
2005-09-15
Country
Japan
Admin level 1
Kanagawa
Isolate name
RSVi/Kanagawa.JPN/Sep.05/Ka-2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:45insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.1

Authors

Author affiliations
Maebashi, Gunma 371-0052

INSDC

INSDC accession
NCBI release date
2010-11-11
NCBI update date
2013-10-16

Alignment and QC metrics

Length
550
Completeness
3.61%
# of SNPs
39
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
AB500677.1
Submitting group
Date submitted
2025-12-22 16:27:17 UTC
Date released
2025-12-22 16:35:20 UTC
Earliest release date
2010-11-11

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T5741C
  • G5753A
  • A5780G
  • G5810T
  • A5879C
  • T5903A
  • T5948A
  • C5980G
  • T5983C
  • G5993A
  • C6017T
  • C6037A
  • A6039C
  • C6040G
  • T6055C
  • C6058T
  • A6060T
  • A6066C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:L45F
  • F:K68N
  • F:A102G
  • F:V103A
  • F:T121N
  • F:T122R
  • F:V127A
  • F:S128L
  • F:I129L
  • F:K131Q
  • F:K132D
  • F:R133T
  • F:G143R
  • F:V154A
  • F:S155P
  • F:K156Q
  • F:N165K
  • F:I167F
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue