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PP_000TZQZ.2
Version 2
PP_000TZQZ.1
Previous version
PP_000TZQZ.2
Latest version
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Download FASTA
Download metadata TSV
USA/PP_000TZQZ.2/2022-08
J. Sereewit,
H. Xie,
P. Roychoudhury &
A. L. Greninger
UW Virology, Laboratory Medicine
Sample details
Collection date
2022-08
Sampling location
USA (OH)
Isolate name
MpxV/human/USA/OH-UW-082260/2022
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession
OP257256.1
BioProject accession
PRJNA862948
BioSample accession
SAMN30526451
NCBI release date
2022-08-19
NCBI update date
2022-09-07
Raw reads accession
SRR21236089
Host
Host
human (Homo sapiens)
Submission details
Submission ID
OP257256.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-02-03 15:01:44 UTC
Date released
2025-02-03 15:06:57 UTC
Earliest release date
2022-08-19
Cited in
Improving the Scalability of Bayesian Phylodynamic Inference through Efficient MCMC Proposals (2025)
Remco R. Bouckaert, Paula H. Weidemüller, Luis R. Esquivel Gomez, Nicola F. Müller
From SeqSet:
PP_SS_199.2
(references PP_000TZQZ.2)
Nucleotide mutations
Mutations called relative to the
NC_063383.1
reference
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_063383.1
reference
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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