PP_000T7Y9.1

USA/PP_000T7Y9.1
N. Shashan, J. Makarenko, L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Sampling location
USA (MD)
Isolate name
USA-2003

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-12-09 18:48insdc_ingest_userOPEN
Data use terms URL

Clade & Lineage

Clade
IIb
Outbreak
None
Lineage
None

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-07-30
NCBI update date
2022-07-30

Submission details

Submission ID
OK573086.1
Submitting group
Date submitted
2024-12-09 18:47:55 UTC
Date released
2024-12-09 18:50:13 UTC
Earliest release date
2022-07-30

Alignment and QC

Length
473 (0.263%)
# of SNPs
3
# of deleted bases
46
# of frame shifts
1
Frame shifts
OPG105:124-1287(nt:81495-84986)

Nucleotide mutations

Mutations called relative to the NC_063383.1 reference

Substitutions

  • T81440A
  • T81442C
  • T81443A
Deletions

81449-81494
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_063383.1 reference

Substitutions

OPG105

  • OPG105:D105E
  • OPG105:I106T
Deletions

OPG105

OPG105:109-123
Insertions
N/A

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