PP_000T7BJ.1

USA/PP_000T7BJ.1
N. Shashan, J. Makarenko, L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Sampling location
USA (MD)
Isolate name
USA-2003

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-12-09 18:48insdc_ingest_userOPEN
Data use terms URL

Clade & Lineage

Clade
II
Outbreak
None
Lineage
None

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-07-30
NCBI update date
2022-07-30

Submission details

Submission ID
OK573065.1
Submitting group
Date submitted
2024-12-09 18:47:55 UTC
Date released
2024-12-09 18:50:13 UTC
Earliest release date
2022-07-30

Alignment and QC

Length
574 (0.354%)
# of SNPs
5
# of deleted bases
125
# of frame shifts
1
Frame shifts
OPG170:197-222(nt:146113-146190)

Nucleotide mutations

Mutations called relative to the NC_063383.1 reference

Substitutions

  • A146183T
  • G146189T
  • C146321A
  • C146687T
  • A146877T
Deletions

146191-146315
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_063383.1 reference

Substitutions

OPG170

  • OPG170:G31D
  • OPG170:R153I
Deletions

OPG170

OPG170:156-196
Insertions
N/A

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