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PP_000T6G9.2
Version 2
PP_000T6G9.1
Previous version
PP_000T6G9.2
Latest version
All versions
Download
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Download metadata TSV
USA/PP_000T6G9.2
N. Shashan,
J. Makarenko,
L. Tallon,
L. Sadzewicz,
K. Vavikolanu,
A. Mehta,
J. Aluvathingal,
S. Nadendla,
T. Myers,
Y. Yan &
H. Sichtig
US Food and Drug Administration, Center for Devices and Radiological Health
Sample details
Sampling location
USA (MD)
Isolate name
USA-2003
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2024-12-09 18:48
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Clade & Lineage
Clade
IIa
Outbreak
None
Lineage
None
INSDC
INSDC accession
OK573036.1
BioProject accession
PRJNA231221
BioSample accession
SAMN11078000
NCBI release date
2022-07-30
NCBI update date
2022-07-30
Raw reads accession
SRR10017689
Submission details
Submission ID
OK573036.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-02-03 15:01:44 UTC
Date released
2025-02-03 15:02:25 UTC
Earliest release date
2022-07-30
Alignment and QC
Length
1139 (0.578%)
# of SNPs
2
Nucleotide mutations
Mutations called relative to the
NC_063383.1
reference
Substitutions
T
130846
C
A
131548
G
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_063383.1
reference
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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