PP_000T631.1

USA/PP_000T631.1
N. Shashan, J. Makarenko, L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Sampling location
USA (MD)
Isolate name
USA-2003

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-12-09 18:48insdc_ingest_userOPEN
Data use terms URL

Clade & Lineage

Clade
IIa
Outbreak
None
Lineage
None

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-07-30
NCBI update date
2022-07-30

Submission details

Submission ID
OK573023.1
Submitting group
Date submitted
2024-12-09 18:47:55 UTC
Date released
2024-12-09 18:50:13 UTC
Earliest release date
2022-07-30

Alignment and QC

Length
2367 (1.2%)
# of SNPs
8

Nucleotide mutations

Mutations called relative to the NC_063383.1 reference

Substitutions

  • T83599C
  • T83645C
  • G83661A
  • A84278G
  • A84333G
  • G84373A
  • C85145T
  • T85163C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_063383.1 reference

Substitutions

OPG105

  • OPG105:V825A
  • OPG105:V846I
  • OPG105:I1070V
  • OPG105:S1083N
Deletions
N/A
Insertions
N/A

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