PP_000REKY.3

Iran/PP_000REKY.3/2022
S. Sarmadi, H. Najafi, Z. Ziafati Kafi, N. Sadri, F. Jamiri, A. Bakhshi, A. Abbassioun & A. Ghalyanchi Langeroudi

University of Tehran, Microbiology & Immunology

Sample details

Collection date
2022
Sampling location
Iran
Isolate name
UT-SS1

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:11insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession S
NCBI release date
2024-01-24

Host

Host

Submission details

Submission ID
PP107910.1.S
Submitting group
Date submitted
2024-10-29 17:10:51 UTC
Date released
2024-10-29 17:16:10 UTC
Earliest release date
2024-01-24

Lineage

Segment S Lineage
IV.1

Alignment and QC

Length S
154 (9.21%)
# of SNPs S
27

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T334G
  • A337G
  • C343T
  • G346A
  • A358G
  • C361T
  • G367A
  • C370T
  • A379G
  • A394G
  • G397A
  • C400T
  • C403A
  • C406T
  • G409C
  • G418A
  • G421A
  • A425T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124S
  • NP:G125N
Deletions
N/A
Insertions
N/A

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