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Status
PP_000RDLX.3
All versions
PP_000RDLX.1
(Revised)
PP_000RDLX.2
(Revised)
PP_000RDLX.3
(Latest version)
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Display Name: Iran/PP_000RDLX.3/2023-05-01
Mohammadi-Ghalehbin,
B.; Soozangar,
N.; Jeddi,
F.; Mirzanejad-Asl,
H.; Molaei,
S.; Habibzadeh,
S.; Peeri Doghaheh,
H.; Mohammadshahi,
J.; Spotin,
A.
Submission details
Submission ID
OR391534.1.S
Submitter
insdc_ingest_user
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-10-29 17:10:51 UTC
Date released
2024-10-29 17:16:10 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-08-27 12:11
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Authors
Author affiliations
Tabriz University od Medical Sceinces, Parasitolgy and Mycology
Alignment states and QC metrics S
Completeness S
37.98%
Length S
467
Total ambiguous nucs S
0
Total deleted nucs S
168
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
70
Total unknown nucs S
0
Sample details
Collection country
Iran
Collection date
2023-05-01
Isolate name
57-203334
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession S
OR391534.1
NCBI release date
2023-10-07
Nucleotide mutations
Substitutions
S
S:
C
187
T
S:
G
189
A
S:
T
199
C
S:
T
211
C
S:
C
217
T
S:
C
244
T
S:
T
250
G
S:
G
262
A
S:
A
268
C
S:
G
271
A
S:
T
274
C
S:
T
283
C
S:
G
292
A
S:
C
295
T
S:
A
298
T
S:
T
304
C
S:
C
310
T
S:
T
313
C
Show more
Deletions
S:647-814
Insertions
None
Amino acid mutations
Substitutions
NP
NP:
R
45
K
NP:
A
100
S
NP:
S
109
N
NP:
T
111
A
NP:
T
124
A
NP:
G
125
N
NP:
H
195
R
NP:
D
199
E
Deletions
None
Insertions
None
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