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Status
PP_000RBTK.2
All versions
PP_000RBTK.1
(Revised)
PP_000RBTK.2
(Latest version)
Download FASTA
Display Name: Turkey/PP_000RBTK.2/2021-01-01
A.T. Kalaycioglu,
R. Durmaz,
A. Engin,
M. Bakir,
O. Ari,
T. Dal,
T.C. Oguzoglu
Submission details
Submission ID
OQ935537.1.M
Submitter
insdc_ingest_user
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-09-26 15:01:57 UTC
Date released
2024-09-26 15:20:44 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-08-27 12:11
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Authors
Author affiliations
Karadeniz Technical University, Faculty of Pharmacy
Alignment states and QC metrics M
Completeness M
16.79%
Frame shifts M
GPC:525-1685(nt:1663-5147)
Length M
861
Total ambiguous nucs M
0
Total deleted nucs M
40
Total frame shifts M
1
Total inserted nucs M
0
Total SNPs M
133
Total unknown nucs M
0
Sample details
Collection country
Turkey
Collection date
2021-01-01
Isolate name
TR-SIVAS-7M-2021
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession M
OQ935537.1
NCBI release date
2023-08-15
Nucleotide mutations
Substitutions
M
M:
A
1620
C
M:
T
1673
C
M:
A
1688
G
M:
A
1694
G
M:
G
1703
A
M:
T
1706
A
M:
C
1715
T
M:
C
1718
T
M:
G
1720
A
M:
C
1721
T
M:
C
1724
T
M:
G
1739
A
M:
C
1745
T
M:
C
1754
T
M:
T
1763
C
M:
C
1766
T
M:
C
1781
T
M:
A
1784
G
Show more
Deletions
M:1623-1662
Insertions
None
Amino acid mutations
Substitutions
Deletions
GPC:511-524
Insertions
None
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