PP_000R95Y.3

Turkey/PP_000R95Y.3/2021
A. T. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin, M. Bakir, E. Erdem & T. Dal

Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology

Sample details

Collection date
2021
Sampling location
Turkey
Isolate name
TR-SIVAS-C18F-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:11insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2023-02-21

Host

Host

Submission details

Submission ID
ON640908.1.L
Submitting group
Date submitted
2024-10-29 17:10:51 UTC
Date released
2024-10-29 17:15:40 UTC
Earliest release date
2023-02-21

Alignment and QC

Length L
8430 (69.6%)
# of SNPs L
873

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • T3505C
  • G3523A
  • T3529C
  • T3565G
  • G3568A
  • C3571T
  • C3572T
  • A3583G
  • C3586T
  • C3595T
  • T3607C
  • T3625C
  • T3646C
  • G3652A
  • G3676A
  • A3679G
  • A3685T
  • G3711A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

RdRp

  • RdRp:D1163E
  • RdRp:R1212K
  • RdRp:G1214S
  • RdRp:V1228I
  • RdRp:E1269V
  • RdRp:K1272R
  • RdRp:V1317I
  • RdRp:N1367D
  • RdRp:L1386I
  • RdRp:S1436N
  • RdRp:S1454A
  • RdRp:R1456K
  • RdRp:I1458L
  • RdRp:R1478K
  • RdRp:V1495I
  • RdRp:V1577I
  • RdRp:V1601I
  • RdRp:K1656R
Deletions
N/A
Insertions
N/A

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