PP_000R908.3

Turkey/PP_000R908.3/2021
A. T. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin, M. Bakir & E. Erdem

Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology

Sample details

Collection date
2021
Sampling location
Turkey
Isolate name
TR-SIVAS-C21F-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:11insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession M
NCBI release date
2023-02-20

Host

Host

Submission details

Submission ID
ON623085.1.M
Submitting group
Date submitted
2024-10-29 17:10:51 UTC
Date released
2024-10-29 17:15:40 UTC
Earliest release date
2023-02-20

Alignment and QC

Length M
5364 (100%)
# of SNPs M
1054
# of inserted bases M
1
# of deleted bases M
3

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • T40A
  • G50A
  • A51G
  • T67C
  • T68C
  • A69G
  • T71A
  • G76C
  • A80G
  • G84A
  • T86C
  • A88G
  • C92T
  • T94C
  • T100C
  • T102C
  • C103T
  • A108G
Deletions

M

327-329
Insertions

M

ins_5175:A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:M1T
  • GPC:I3T
  • GPC:S4L
  • GPC:M6V
  • GPC:Y7C
  • GPC:A8F
  • GPC:C11Y
  • GPC:C15L
  • GPC:L17R
  • GPC:E19G
  • GPC:T20A
  • GPC:S23Q
  • GPC:H24S
  • GPC:E26A
  • GPC:R28E
  • GPC:K31G
  • GPC:D33N
  • GPC:M35T
Deletions

GPC

GPC:90
Insertions
N/A

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