PP_000JSDD.3

Display Name: USA/PP_000JSDD.3/1931-08-05
L. Bertolotti, E. D. Walker, J. Brawn, M. O. Ruiz, G. L. Hamer, S. Loss, U. Kitron & T. L. Goldberg

Sample details

Collection date
1931-08-05
Country
USA
Admin level 1
Illinois, Cook County
Isolate name
CpPs10

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:09insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
1A

Authors

Author affiliations
University of Illinois at Urbana Champaign, Department of Pathobiology

INSDC

INSDC accession
NCBI release date
2008-05-31
NCBI update date
2016-07-26

Host

Host taxon ID
Host name - scientific
Culex pipiens

Alignment and QC metrics

Length
1575
Completeness
14.28%
# of SNPs
6
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
EF631122.1
Submitting group
Date submitted
2024-10-29 17:09:23 UTC
Date released
2024-10-29 17:17:16 UTC
Earliest release date
2008-05-31

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A1320G
  • T1442C
  • C1465T
  • T2073C
  • C2172T
  • C2466T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    env

  • env:V159A
  • env:L167F
    • Deletions
    None
    Insertions
    None

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