PP_00000UB.4

Display Name: Uganda/PP_00000UB.4/2000-10-16
S. R. Das, R. Shabman, R. A. Halpin, A. Akopov, N. Fedorova, V. Puri, T. Stockwell, P. Amedeo, B. Bishop, D. Katzel, S. Schobel, S. Shrivastava, T. Brasel, N. Yun, S. Paessler, W. Dowling & A. Barrett

Sample details

Collection date
2000-10-16
Country
Uganda
Isolate name
Sudan virus/H. sapiens-tc/SDN/2000/Gulu-200011676

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-08-27 12:07insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
J. Craig Venter Institute

INSDC

INSDC accession
BioProject accession
NCBI release date
2015-12-22
NCBI update date
2015-12-22

Host

Host taxon ID
Host name - scientific
Homo sapiens
Is lab host
True

Alignment and QC metrics

Length
18875
Completeness
100.00%
# of SNPs
4
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
KU182912.1
Version comment
https://github.com/pathoplexus/curation_reports/issues/2
Submitting group
Date submitted
2024-11-27 15:48:23 UTC
Date released
2024-11-27 16:03:51 UTC
Earliest release date
2015-12-22

Nucleotide mutations

Mutations called relative to the NC_006432.1 reference

Substitutions

  • C2618T
  • C5320T
  • G5902T
  • A18875C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_006432.1 reference

    Substitutions

    NP

  • NP:L721F
    • Deletions
    None
    Insertions
    None

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