PP_0084VFT.1

Democratic_Republic_of_the_Congo/NIA-1039/2026-10-10
Phine Malengo-Olokakoy, Divine Asante-Anite, Prince Akil-Bandali, Pauline-Chloé Muswamba-Kayembe, Tina Bakutumba-Loweya, Adrienne Amuri-Aziza, Pascal Adroba-Tandele, Emmanuel Lokilo-Lofiko, Benjamin Djemba-Fundji, Eddy Kinganda-Lusamaki, Rilia Ola-Mpumbe, Ange Museme-Mponga, Sifa Bapitani-Kavira, Joceline Tshimbolela, Berkias Bakambu-Nebape, Gradi Luakanda-Ndelemo, Princesse Paku-Tshambu, Neema Sindani-Kavugho, Marcel Lola-Loway, Nelson Mapenzi-Kashali, Fiston Cikaya-Kankolongo, Raphael Lumembe-Numbi, Jean-Claude Makangara-Cigolo, Sam Wilkinson, ..., Placide Mbala-Kingebeni

Institut National de Recherche Biomédicale

Sample details

Collection date
2026-10-10
Sample received date
2026-10-11
Sampling location
Democratic Republic of the Congo (Niania, Ituri)
Isolate name
NIA-1039

Outbreak

Amino acid substitutions from outbreak clade founder
  • L:I1562L
  • L:N1753S
Outbreak
Bdbv-2026

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Sequencing

Sequencing date
2026-10-26
Sequencing instrument
GridION
Sequencing protocol
Amplicon_Artic_artic-pan-ebola/1000/v2.0.0
Depth of coverage
103

Submission details

Submission ID
NIA-1039
Submitting group
Date submitted
2026-11-05 17:02:51 UTC
Date released
2026-11-05 17:03:01 UTC
Earliest release date
2026-11-05

Files

Annotations

Alignment and QC

Length
18404 (88%)
# of SNPs
187
# of inserted bases
1
# of unknown bases
1744
# of frame shifts
2
Frame shifts
GP:301-677(nt:6918-8050),GP_003:300-374(nt:6918-7142)

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • G1924A
  • A1943G
  • A1954G
  • A2007G
  • G2027A
  • T2049C
  • G2067A
  • G2087A
  • G2093A
  • C2163T
Deletions
N/A
Insertions
ins_6917:A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K

GP_003

  • GP_003:Y151F
  • GP_003:E188K

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:I1562L
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:K1738N
  • L:N1753S
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:N496D
  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP30

  • VP30:H5Y

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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