PP_00835TU.1

Democratic_Republic_of_the_Congo/BIA-10972/2026-10-16
Pauline-Chloé Muswamba-Kayembe, Divine Asante-Anite, Emmanuel Lokilo-Lofiko, Tina Bakutumba-Loweya, Phine Malengo-Olokakoy, Prince Akil-Bandali, Adrienne Amuri-Aziza, Pascal Adroba-Tandele, Benjamin Djemba-Fundji, Eddy Kinganda-Lusamaki, Rilia Ola-Mpumbe, Ange Museme-Mponga, Sifa Bapitani-Kavira, Joceline Tshimbolela, Berkias Bakambu-Nebape, Gradi Luakanda-Ndelemo, Princesse Paku-Tshambu, Neema Sindani-Kavugho, Marcel Lola-Loway, Nelson Mapenzi-Kashali, Fiston Cikaya-Kankolongo, Raphael Lumembe-Numbi, Jean-Claude Makangara-Cigolo, Sam Wilkinson, ..., Placide Mbala-Kingebeni

Institut National de Recherche Biomédicale

Sample details

Collection date
2026-10-16
Sample received date
2026-10-17
Sampling location
Democratic Republic of the Congo (Bunia, Ituri)
Isolate name
BIA-10972

Outbreak

Amino acid substitutions from outbreak clade founder
  • GP:P344S
  • GP:S365P
  • GP:M379T
  • GP:L389P
  • GP:I458T
  • GP:I486T
  • L:E350G
  • L:I1562L
  • L:A1736V
  • NP:N633S
Outbreak
Bdbv-2026

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Sequencing

Sequencing date
2026-10-23
Sequencing instrument
GridION
Sequencing protocol
Amplicon_Artic_bdbv-2026/400/v1.0.0
Depth of coverage
198

Submission details

Submission ID
BIA-10972
Submitting group
Date submitted
2026-10-27 14:32:47 UTC
Date released
2026-10-27 14:32:59 UTC
Earliest release date
2026-10-27

Files

Annotations

Alignment and QC

Length
18805 (98%)
# of SNPs
216
# of unknown bases
253

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • C261T
  • A266G
  • C530T
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • G1924A
  • A1943G
  • A1954G
  • A2007G
  • G2027A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:P344S
  • GP:M379T
  • GP:Y387H
  • GP:R394G
  • GP:P481L
  • GP:A489V
  • GP:R506S

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

L

  • L:E350G
  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:I1562L
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:A1736V
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:N496D
  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V
  • NP:N633S

VP24

  • VP24:S24N

VP30

  • VP30:H5Y

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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