PP_0082RV6.1

Democratic_Republic_of_the_Congo/NIZ-3979/2026-10-07
Prince Akil-Bandali, Phine Malengo-Olokakoy, Pauline-Chloé Muswamba-Kayembe, Emmanuel Lokilo-Lofiko, Tina Bakutumba-Loweya, Divine Asante-Anite, Adrienne Amuri-Aziza, Benjamin Djemba-Fundji, Pascal Adroba-Tandele, Eddy Kinganda-Lusamaki, Rilia Ola-Mpumbe, Ange Museme-Mponga, Sifa Bapitani-Kavira, Joceline Tshimbolela, Berkias Bakambu-Nebape, Gradi Luakanda-Ndelemo, Princesse Paku-Tshambu, Neema Sindani-Kavugho, Marcel Lola-Loway, Nelson Mapenzi-Kashali, Fiston Cikaya-Kankolongo, Raphael Lumembe-Numbi, Jean-Claude Makangara-Cigolo, Sam Wilkinson, ..., Placide Mbala-Kingebeni

Institut National de Recherche Biomédicale

Sample details

Collection date
2026-10-07
Sample received date
2026-10-08
Sampling location
Democratic Republic of the Congo (Mangala, Ituri)
Isolate name
NIZ-3979

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Outbreak

Outbreak
Bdbv-2026

Sequencing

Sequencing date
2026-10-22
Sequencing instrument
GridION
Sequencing protocol
Amplicon_Artic_pan-ebola/1000/v2.0.0
Depth of coverage
217

Submission details

Submission ID
NIZ-3979
Submitting group
Date submitted
2026-10-24 13:14:31 UTC
Date released
2026-10-24 13:14:48 UTC
Earliest release date
2026-10-24

Files

Annotations

Alignment and QC

Length
18403 (97.2%)
# of SNPs
224
# of unknown bases
1

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • C261T
  • A266G
  • C530T
  • A556G
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • G1924A
  • A1943G
  • A1954G
  • A2007G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:P365S
  • GP:P367L
  • GP:Y387H
  • GP:P389L
  • GP:R394G
  • GP:T458I
  • GP:P481L
  • GP:T486I
  • GP:A489V
  • GP:R506S

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:N496D
  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP24

  • VP24:S24N

VP30

  • VP30:H5Y

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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