Democratic_Republic_of_the_Congo/NIAN-349/2026-08-12
Prince Akil-Bandali, Pauline-Chloé Muswamba-Kayembe, Sifa Bapitani-Kavira, Benjamin Djemba-Fundji, Adrienne Amuri-Aziza, Pascal Adroba-Tandele, Rilia Ola-Mpumbe, Ange Museme-Mponga, Emmanuel Lokilo-Lofiko, Eddy Kinganda-Lusamaki, Joceline Tshimbolela, Berkias Bakambu-Nebape, Gradi Luakanda-Ndelemo, Princesse Paku-Tshambu, Neema Sindani-Kavugho, Marcel Lola-Loway, Nelson Mapenzi-Kashali, Fiston Cikaya-Kankolongo, Raphael Lumembe-Numbi, Jean-Claude Makangara-Cigolo, Sam Wilkinson, Josh Quick, Andre Citenga, Olga Ntumba-Tshitenge, ..., Placide Mbala-Kingebeni

Institut National de Recherche Biomédicale

Sample details

Collection date
2026-08-12
Sample received date
2026-08-14
Sampling location
Democratic Republic of the Congo (Niania, Ituri)
Isolate name
NIAN-349

Data use terms

Data use terms
RESTRICTED

Outbreak

Outbreak
Bdbv-2026

Sequencing

Sequencing date
2026-09-12
Sequencing instrument
GridION
Sequencing protocol
Amplicon_Artic_bdbv/400

Submission details

Submission ID
NIAN-349
Submitting group
Date submitted
2026-09-14 18:01:36 UTC
Date released
2026-09-14 18:01:52 UTC
Earliest release date
2026-09-14

Alignment and QC

Length
18404 (83.1%)
# of SNPs
173
# of unknown bases
2673

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C530T
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • T2049C
  • G2067A
  • G2087A
  • G2093A
  • C2163T
  • T2188C
  • T2383C
  • G2676A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:P365S
  • GP:P367L

GP_003

  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP24

  • VP24:S24N

VP30

  • VP30:H5Y

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue