PP_007LCSP.1

Ireland/PP_007LCSP.1/2026-04-22
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-04-22
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20526629

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host

Sequencing

Sequencing instrument
NextSeq 1000

Submission details

Submission ID
hRSV/B/Ireland/un-NVRL-VIRL00000419/2026
Submitting group
Date submitted
2026-09-10 16:41:40 UTC
Date released
2026-09-10 16:43:33 UTC
Earliest release date
2026-09-10

Alignment and QC

Length
15207 (99.9%)
# of SNPs
159
# of inserted bases
6
# of deleted bases
2

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A16G
  • A134G
  • A188C
  • A473G
  • G513T
  • G579A
  • C688T
  • T707C
  • G830A
  • C998A
  • A1030G
  • T1189C
  • G1385A
  • G1453A
  • T1489C
  • G1732A
  • T1846C
  • C1957T
Deletions
973, 4586
Insertions
ins_15092:ATATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:F166Y
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:K260R
  • L:K570R
  • L:R1759K
  • L:T1795A
  • L:V1965I
  • L:T1987I

M2-1

  • M2-1:E136D

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS2

  • NS2:E83K

SH

  • SH:G2E
Deletions
N/A
Insertions
N/A

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