PP_007LC7U.1

Ireland/PP_007LC7U.1/2026-05-12
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-05-12
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20526613

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.1.9

Host

Host

Sequencing

Sequencing instrument
NextSeq 1000

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-VIRL00000469/2026
Submitting group
Date submitted
2026-09-10 16:36:03 UTC
Date released
2026-09-10 16:39:17 UTC
Earliest release date
2026-09-10

Alignment and QC

Length
15224 (100%)
# of SNPs
240
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • C90T
  • T142C
  • C183T
  • G198A
  • T210C
  • A399G
  • A500T
  • G510A
  • C528A
  • A529C
  • G551A
  • G555A
  • T659C
  • G664A
  • T697C
  • G901A
Deletions
4592
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:A17V
  • F:S377N
  • F:I542V

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T118I
  • G:I134K
  • G:L142S
  • G:P222L
  • G:G224E
  • G:L226H
  • G:G232R
  • G:T235A
  • G:S243I
  • G:G254E
  • G:K262E
  • G:I265L
  • G:Y273H
  • G:D284G
  • G:Y304H
  • G:T320A

L

  • L:N143D
  • L:P171L
  • L:T179S
  • L:R256K
  • L:Y598H
  • L:K1145R
  • L:L1438Q
  • L:A1479V
  • L:I1653V
  • L:K1661N
  • L:N1723S
  • L:E1725G
  • L:K1726R
  • L:G1731D
  • L:S1789F
  • L:H1897N
  • L:Y2163N

M

  • M:M43I

M2-1

  • M2-1:N142Y
  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:V352A

P

  • P:L55P

SH

  • SH:I38S
Deletions
N/A
Insertions
N/A

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