PP_007KYR7.1

Australia/PP_007KYR7.1/2026-04-30
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

WHO Collaborating Centre for Reference and Research on Influenza

Sample details

Collection date
2026-04-30
Sampling location
Australia (Victoria)
City
Melbourne
GISAID Isolate ID
EPI_ISL_20521616

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.5.2

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Sampling

Sample type
NA

Host

Host gender
Female

Submission details

Submission ID
hRSV/A/Australia/VIC-MMC-0020/2026
Submitting group
Date submitted
2026-09-08 06:02:11 UTC
Date released
2026-09-08 06:04:06 UTC
Earliest release date
2026-09-08

Alignment and QC

Length
15220 (100%)
# of SNPs
251
# of inserted bases
4
# of deleted bases
5

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • C90T
  • A135T
  • C165T
  • C183T
  • T246C
  • C492A
  • C606T
  • T697C
  • A813G
  • T922C
  • A940C
  • T1004C
  • A1009G
  • A1021G
  • T1028C
  • G1050A
Deletions
4592, 7516-7518, 15110
Insertions
ins_0:TTGC

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:A103T
  • F:T122A

G

  • G:A57V
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:I134K
  • G:Q140R
  • G:L142P
  • G:P206Q
  • G:K209R
  • G:G224E
  • G:S243I
  • G:L248I
  • G:K262E
  • G:T264A
  • G:I265L
  • G:S283P
  • G:D284G
  • G:V303A

L

  • L:D148E
  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:N1723G
  • L:E1725G
  • L:G1731D
  • L:T1942I
  • L:V1943D

M

  • M:M73L

M2-1

  • M2-1:S176P

M2-2

  • M2-2:S44N

N

  • N:I104V
  • N:T120A
  • N:V352A

NS2

  • NS2:T3I
  • NS2:K72R

P

  • P:L55P
  • P:T69I
  • P:E239D

SH

  • SH:H22Y
Deletions
N/A
Insertions
N/A

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