PP_007JWE0.1

Brazil/ITpS_RWK_001ne_001/2026-05-19
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-05-19
Sampling location
Brazil (Minas Gerais)
City
Betim

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host
Host age
0.4
Host gender
Female

Sequencing

Sequencing instrument
ILLUMINA
Depth of coverage
18403

Submission details

Submission ID
ITpS_RWK_001ne_001
Submitting group
Date submitted
2026-08-28 13:46:51 UTC
Date released
2026-08-28 13:48:25 UTC
Earliest release date
2026-08-28

Alignment and QC

Length
14563 (97.9%)
# of SNPs
164
# of inserted bases
1
# of deleted bases
433
# of unknown bases
100
# of frame shifts
1
Frame shifts
L:2063-2167(nt:14704-15018)

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • C3G
  • T353A
  • T498C
  • G513T
  • G579A
  • T907C
  • C998A
  • C1015T
  • T1040C
  • T1041C
  • A1078G
  • G1085A
  • G1385A
  • A1606G
  • C1657T
  • G1732A
  • T1846C
  • C1868T
Deletions
966, 967, 1080-1083, 4580, 4581, 8447-8868, 14688-14690
Insertions
ins_14703:C

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:A107T
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:T225N
  • G:L250F
  • G:I252T
  • G:K256N
  • G:H257Y
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:V179A
  • L:K570R
  • L:L1031I
  • L:R1759K
  • L:T1987I
  • L:P2061L

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions

L

L:2058
Insertions
N/A

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