PP_007JWA8.1

Brazil/ITpS_0jM_001nQ_001/2026-05-03
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-05-03
Sampling location
Brazil (Minas Gerais)
City
Ribeirão das Neves

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host
Host age
0.3
Host gender
Female

Sequencing

Sequencing instrument
ILLUMINA
Depth of coverage
3980

Submission details

Submission ID
ITpS_0jM_001nQ_001
Submitting group
Date submitted
2026-08-28 13:46:51 UTC
Date released
2026-08-28 13:48:25 UTC
Earliest release date
2026-08-28

Alignment and QC

Length
14569 (97.9%)
# of SNPs
148
# of deleted bases
426
# of unknown bases
100

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • C3G
  • A261G
  • G513T
  • G579A
  • C878T
  • C998A
  • T1135C
  • C1145T
  • T1273C
  • G1385A
  • G1531A
  • C1591T
  • G1732A
  • T1846C
  • C2074T
  • A2089G
  • C2198T
  • A2254C
Deletions
966, 967, 4580, 4581, 8447-8868
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:Q172L
  • F:L173S
  • F:S190N
  • F:S211N
  • F:S389P
  • F:I402V

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:K276E
  • G:Y285H
  • G:*311Q

L

  • L:E165D
  • L:K570R
  • L:S610P
  • L:T1709A
  • L:N1725D
  • L:R1759K
  • L:T1987I
  • L:V2158I

M

  • M:T245I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
  • N:E386D

NS1

  • NS1:N69D

NS2

  • NS2:H99Y
Deletions
N/A
Insertions
N/A

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