PP_007HSAE.1

Thailand/AB4153/2022-11-18
S. Khongwichit, W. Chuchaona, S. Vongpunsawad & Y. Poovorawan

Chulalongkorn University, Pediatrics, Faculty of Medicine

Sample details

Collection date
2022-11-18
Sampling location
Thailand
Isolate name
AB4153

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2023-11-02
NCBI update date
2023-11-02

Host

Host

Submission details

Submission ID
OR264644.1
Submitting group
Date submitted
2026-08-26 14:12:01 UTC
Date released
2026-08-26 14:14:59 UTC
Earliest release date
2023-11-02

Alignment and QC

Length
10602 (98.1%)
# of SNPs
141

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • A254G
  • T308C
  • A523G
  • T558C
  • T578C
  • G653A
  • A727G
  • G758A
  • C786T
  • C878T
  • T909C
  • C986T
  • T1067C
  • C1073T
  • A1175G
  • C1616T
  • G1799A
  • C2129T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

E

  • E:M473V

NS1

  • NS1:K120R
  • NS1:E146K
  • NS1:A233T
  • NS1:V349M

NS2A

  • NS2A:M38T
  • NS2A:I154V
  • NS2A:A157V
  • NS2A:F180L
  • NS2A:G187R
  • NS2A:K188R

NS3

  • NS3:H584Y

NS4B

  • NS4B:I26T
  • NS4B:Y239H
  • NS4B:I240T

NS5

  • NS5:V114M
  • NS5:P139S
  • NS5:T229I
  • NS5:F294L
  • NS5:G561R

pr

  • pr:N17S
  • pr:K85R

prM

  • prM:N17S
  • prM:K85R
Deletions
N/A
Insertions
N/A

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