PP_007ATRX.1

Canada/PP_007ATRX.1/2026-06
J. Hiebert, S. Ashfaq, S. Van Driel, V. Zubach, A. Jassem & B. Cheung

Public Health Agency of Canada, MMR Unit; British Columbia Centre for Disease Control, Public Health Laboratory

Sample details

Collection date
2026-06
Sampling location
Canada (British Columbia)

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Genotype

Genotype
D8

Submission details

Submission ID
MVs/British_Columbia.CAN/24.26
Submitting group
Date submitted
2026-08-05 12:38:38 UTC
Date released
2026-08-05 12:41:57 UTC
Earliest release date
2026-08-05

Alignment and QC

Length
15678 (98.6%)
# of SNPs
512

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions
  • G122A
  • T224C
  • A257G
  • G269A
  • A282G
  • G293A
  • G305A
  • C341T
  • A344G
  • G353A
  • G368A
  • A413G
  • T422C
  • T449C
  • C497T
  • C518T
  • C538T
  • T572C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

C

  • C:K78R
  • C:M139T
  • C:G181V

F

  • F:G2D
  • F:A9V
  • F:F11V

H

  • H:G235E
  • H:G243E
  • H:R334Q
  • H:N390I
  • H:Q391R
  • H:A400T
  • H:N416D
  • H:T446S
  • H:V451M
  • H:N481S
  • H:I564L
  • H:V608A
  • H:N615S

L

  • L:P43S
  • L:A81T
  • L:T183A
  • L:H191R
  • L:K215R
  • L:I235V
  • L:A252T
  • L:P275S
  • L:F321C
  • L:E329D
  • L:L411M
  • L:K482R
  • L:L610S
  • L:Y613H
  • L:V632I
  • L:N641D
  • L:I650M
  • L:T652A

N

  • N:I59V
  • N:S144F
  • N:S298A
  • N:I406T
  • N:G434S
  • N:K441R
  • N:G443S
  • N:Y451N
  • N:A459S
  • N:P467L
  • N:M471T
  • N:R497K
  • N:G509S
  • N:D525E

P

  • P:E54K
  • P:T92A
  • P:K195R
  • P:S219G
  • P:T223A
  • P:A244V
  • P:A269V
  • P:I282T
  • P:G303E
  • P:R355K
  • P:V414A
  • P:V446M
  • P:A459V

V

  • V:E54K
  • V:T92A
  • V:K195R
  • V:S219G
  • V:T223A
  • V:G237S
Deletions
N/A
Insertions
N/A

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