PP_007A9KT.1

Brazil/ITpS_GBG_001X1_001/2026-04-23
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-04-23
Sampling location
Brazil (Minas Gerais)
City
Betim

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host
Host age
1
Host gender
Female

Sequencing

Sequencing instrument
ILLUMINA
Depth of coverage
77

Submission details

Submission ID
ITpS_GBG_001X1_001
Submitting group
Date submitted
2026-08-03 14:36:17 UTC
Date released
2026-08-03 14:36:52 UTC
Earliest release date
2026-08-03

Alignment and QC

Length
15146 (99.4%)
# of SNPs
165
# of inserted bases
6
# of deleted bases
8
# of unknown bases
21
# of frame shifts
1
Frame shifts
L:1673-2167(nt:13532-15018)

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A134G
  • G513T
  • G579A
  • G637A
  • C688T
  • C998A
  • A1111G
  • G1117T
  • T1119G
  • T1126C
  • C1361G
  • A1362T
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
Deletions
966, 967, 4580, 4581, 13528-13531
Insertions
ins_3204:GAA, ins_15088:TAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P
  • F:I402V

G

  • G:A74V
  • G:T131A
  • G:I137T
  • G:P214F
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:D271G
  • G:S275P
  • G:Y285H

L

  • L:T171A
  • L:S552C
  • L:K570R

M2-1

  • M2-1:I173V

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:K7N
  • N:L8W
  • N:H89V
  • N:V97I

NS2

  • NS2:M18I

SH

  • SH:D64N
Deletions

L

L:1671, L:1672
Insertions
N/A

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