PP_007A9E4.1

Brazil/ITpS_eRL_001Ws_001/2026-04-20
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-04-20
Sampling location
Brazil (Minas Gerais)
City
Contagem

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
B.D.E.1.1

Host

Host
Host age
80
Host gender
Male

Sequencing

Sequencing instrument
ILLUMINA
Depth of coverage
42

Submission details

Submission ID
ITpS_eRL_001Ws_001
Submitting group
Date submitted
2026-08-03 14:36:17 UTC
Date released
2026-08-03 14:36:52 UTC
Earliest release date
2026-08-03

Alignment and QC

Length
13644 (94.7%)
# of SNPs
130
# of inserted bases
1
# of deleted bases
1345
# of unknown bases
566
# of frame shifts
2
Frame shifts
F:173-575(nt:6192-7400),L:900-2167(nt:11215-15018)

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A276G
  • G513T
  • G579A
  • C628T
  • T935C
  • C998A
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • T2589C
  • C2691T
  • C2707T
  • C3000T
  • G3036C
  • A3060G
Deletions
966, 967, 3182, 3196-4525, 4580, 4581, 5895-5897, 9364-9366, 11214, 14502-14504
Insertions
ins_6191:N

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:T74E

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:T226A
  • G:S309P

L

  • L:N142S
  • L:Y177S
  • L:S178T
  • L:V179A
  • L:L280F
  • L:K570R
  • L:N590S
  • L:L898P

M2-2

  • M2-2:I2T

N

  • N:V97I

NS1

  • NS1:K74E

NS2

  • NS2:Y118H
Deletions

F

F:75

L

L:283
Insertions
N/A

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