PP_007A99E.1

Brazil/ITpS_wKg_001WZ_001/2026-04-12
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-04-12
Sampling location
Brazil (Minas Gerais)
City
Contagem

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
B.D.E.1.2

Host

Host
Host age
0.4
Host gender
Male

Sequencing

Sequencing instrument
ILLUMINA
Depth of coverage
184

Submission details

Submission ID
ITpS_wKg_001WZ_001
Submitting group
Date submitted
2026-08-03 14:36:17 UTC
Date released
2026-08-03 14:36:52 UTC
Earliest release date
2026-08-03

Alignment and QC

Length
15100 (96.9%)
# of SNPs
161
# of inserted bases
4
# of deleted bases
8
# of unknown bases
359
# of frame shifts
2
Frame shifts
N:226-392(nt:1770-2272),G:302-311(nt:5547-5578)

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • G409A
  • G513T
  • G579A
  • C583T
  • G599A
  • C829T
  • G1028A
  • A1132G
  • G1385A
  • G1417A
  • A1507G
  • G1732A
  • T1762G
  • T1764A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
Deletions
973, 1768, 1769, 4586, 5546, 9364-9366
Insertions
ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P
  • F:N515T
  • F:V516G
  • F:T523A

G

  • G:A74V
  • G:S100G
  • G:A116T
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:T254I
  • G:I268T
  • G:A269V
  • G:S275P
  • G:K276E
  • G:Y285H
  • G:Q297P
  • G:T298E
  • G:P299H

L

  • L:S169P
  • L:L280F
  • L:K570R
  • L:I1751V
  • L:R1759K
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:S24N
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
  • N:F223Y

NS1

  • NS1:S118N

NS2

  • NS2:D6N
Deletions

G

G:301

L

L:283

N

N:225
Insertions
N/A

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