PP_007A7X5.1

Brazil/ITpS_jI9_001X9_001/2026-04-25
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-04-25
Sampling location
Brazil (Minas Gerais)
City
Betim

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
A.D.3.7

Host

Host
Host age
0.8
Host gender
Male

Sequencing

Sequencing instrument
Illumina NextSeq
Depth of coverage
5195

Submission details

Submission ID
ITpS_jI9_001X9_001
Submitting group
Date submitted
2026-08-03 14:17:38 UTC
Date released
2026-08-03 14:18:39 UTC
Earliest release date
2026-08-03

Alignment and QC

Length
14909 (98%)
# of SNPs
220
# of inserted bases
3
# of deleted bases
75
# of unknown bases
58
# of frame shifts
1
Frame shifts
L:2110-2166(nt:14859-15029)

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • C55T
  • T59C
  • T65A
  • G74A
  • C90T
  • T231C
  • G587T
  • T619C
  • G637A
  • G955A
  • C1012T
  • G1034A
  • G1050A
  • A1072G
  • G1077A
  • A1080G
  • T1359C
  • T1413A
Deletions
543, 4592, 5435-5506, 7586
Insertions
ins_62:T, ins_67:G, ins_14858:A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:H67N
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:G106R
  • G:T113I
  • G:V131D
  • G:I134K
  • G:R151Q
  • G:N178G
  • G:K221R
  • G:G224E
  • G:S243I
  • G:N251Y
  • G:H258Q
  • G:H290L
  • G:P298L
  • G:T319K

L

  • L:P171L
  • L:R256K
  • L:C283Y
  • L:Y598H
  • L:Y684C
  • L:L835M
  • L:T1087S
  • L:L1438Q
  • L:D1644E
  • L:F1668Y
  • L:N1723S
  • L:E1725G
  • L:G1731D

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:I163V
  • N:V352A

NS1

  • NS1:G2D

P

  • P:L55P
  • P:T92M
Deletions

G

G:262-285
Insertions
N/A

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