PP_007A7QK.1

Brazil/ITpS_7gX_001Wo_001/2026-04-21
A. Pérez, R. Moreira & J. Dutra

Universidade Federal de Minas Gerais (UFMG)

Sample details

Collection date
2026-04-21
Sampling location
Brazil (Minas Gerais)
City
Betim

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
A.D.3

Host

Host
Host age
2
Host gender
Female

Sequencing

Sequencing instrument
Illumina NextSeq
Depth of coverage
15130

Submission details

Submission ID
ITpS_7gX_001Wo_001
Submitting group
Date submitted
2026-08-03 14:17:38 UTC
Date released
2026-08-03 14:18:39 UTC
Earliest release date
2026-08-03

Alignment and QC

Length
15104 (99.7%)
# of SNPs
188
# of inserted bases
6
# of deleted bases
75

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • C90T
  • C183T
  • G198A
  • T210C
  • G587T
  • T619C
  • G637A
  • T659C
  • G955A
  • C1012T
  • G1034A
  • G1050A
  • A1072G
  • G1077A
  • A1080G
  • T1359C
Deletions
3148, 4175, 4592, 5435-5506
Insertions
ins_15053:CAAAAA

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:G106R
  • G:T113I
  • G:I114M
  • G:V131D
  • G:I134K
  • G:L142S
  • G:K221R
  • G:G224E
  • G:S243I
  • G:N251Y
  • G:H258Q
  • G:H290L
  • G:P300L
  • G:Y304H
  • G:T320A

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:T1087S
  • L:L1438Q
  • L:D1644E
  • L:F1668Y
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:Y2163N

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:I163V
  • N:V352A

P

  • P:L55P

SH

  • SH:I38S
Deletions

G

G:262-285
Insertions
N/A

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